Re' Matteo

Imbalance-Aware Machine Learning for Predicting Rare and Common Disease-Associated Non-Coding Variants / M. Schubach, M. Re, P.N. Robinson, G. Valentini. - In: SCIENTIFIC REPORTS. - ISSN 2045-2322. - 7:1(2017 Jun 07), pp. 2959.1-2959.12.

Modeling biomolecular profiles in a graph-structured sample space for clinical outcome prediction with melanoma and ovarian cancer patients / J. Gliozzo, M. Notaro, A. Petrini, P. Perlasca, M. Mesiti, E. Casiraghi, M. Frasca, G. Grossi, M. Re, A. Paccanaro, G. Valentini. ((Intervento presentato al 14. convegno Annual Meeting of the Bioinformatics Italian Society tenutosi a Cagliari nel 2017.

Within network learning on big graphs using secondary memory-based random walk kernels / J. Lin, M. Mesiti, M. Re, G. Valentini - In: Complex Networks & Their Applications V / [a cura di] H. Cherifi, S. Gaito, W. Quattrocchi, A. Sala. - Prima edizione. - [s.l] : Springer Verlag, 2017. - ISBN 9783319509006. - pp. 235-245 (( Intervento presentato al 5. convegno COMPLEX NETWORKS tenutosi a Milano nel 2016.

An expanded evaluation of protein function prediction methods shows an improvement in accuracy / Y. Jiang, T.R. Oron, W.T. Clark, A.R. Bankapur, D. D’Andrea, R. Lepore, C.S. Funk, I. Kahanda, K.M. Verspoor, A. Ben-Hur, D.C.E. Koo, D. Penfold-Brown, D. Shasha, N. Youngs, R. Bonneau, A. Lin, S.M..E. Sahraeian, P.L. Martelli, G. Profiti, R. Casadio, R. Cao, Z. Zhong, J. Cheng, A. Altenhoff, N. Skunca, C. Dessimoz, T. Dogan, K. Hakala, S. Kaewphan, F. Mehryary, T. Salakoski, F. Ginter, H. Fang, B. Smithers, M. Oates, J. Gough, P. Törönen, P. Koskinen, L. Holm, C. Chen, W. Hsu, K. Bryson, D. Cozzetto, F. Minneci, D.T. Jones, S. Chapman, D. Bkc, I.K. Khan, D. Kihara, D. Ofer, N. Rappoport, A. Stern, E. Cibrian-Uhalte, P. Denny, R.E. Foulger, R. Hieta, D. Legge, R.C. Lovering, M. Magrane, A.N. Melidoni, P. Mutowo-Meullenet, K. Pichler, A. Shypitsyna, B. Li, P. Zakeri, S. Elshal, L. Tranchevent, S. Das, N.L. Dawson, D. Lee, J.G. Lees, I. Sillitoe, P. Bhat, T. Nepusz, A.E. Romero, R. Sasidharan, H. Yang, A. Paccanaro, J. Gillis, A.E. Sedeño-Cortés, P. Pavlidis, S. Feng, J.M. Cejuela, T. Goldberg, T. Hamp, L. Richter, A. Salamov, T. Gabaldon, M. Marcet-Houben, F. Supek, Q. Gong, W. Ning, Y. Zhou, W. Tian, M. Falda, P. Fontana, E. Lavezzo, S. Toppo, C. Ferrari, M. Giollo, D. Piovesan, S.C.E. Tosatto, A. del Pozo, J.M. Fernández, P. Maietta, A. Valencia, M.L. Tress, A. Benso, S. Di Carlo, G. Politano, A. Savino, H.U. Rehman, M. Re, M. Mesiti, G. Valentini, J.W. Bargsten, A.D..J. van Dijk, B. Gemovic, S. Glisic, V. Perovic, V. Veljkovic, N. Veljkovic, D.C. Almeida-e-Silva, R.Z..N. Vencio, M. Sharan, J. Vogel, L. Kansakar, S. Zhang, S. Vucetic, Z. Wang, M.J..E. Sternberg, M.N. Wass, R.P. Huntley, M.J. Martin, C. O’Donovan, P.N. Robinson, Y. Moreau, A. Tramontano, P.C. Babbitt, S.E. Brenner, M. Linial, C.A. Orengo, B. Rost, C.S. Greene, S.D. Mooney, I. Friedberg, P. Radivojac. - In: GENOME BIOLOGY. - ISSN 1474-760X. - 17:1(2016 Sep 07).

RANKS : a flexible tool for node label ranking and classification in biological networks / G. Valentini, G. Armano, M. Frasca, J. Lin, M. Mesiti, M. Re. - In: BIOINFORMATICS. - ISSN 1367-4803. - 32:18(2016 Sep), pp. 2872-2874.