Advanced Plant Cell Biotechnology
A.Y. 2026/2027
Learning objectives
The aim of the course is to discuss the criteria and the methods to design or improve a biotechnological process exploiting plant cells or whole plants to produce biomass or substances of industrial or environmental relevance (e.g. biofuels, oils, detergents, vitamins, starch, sugars, biodegradable polymers). An 'on-site' visit to at least one company or research centre is envisaged to make the students aware about plant biotechnology outside the academic environment.
The course is ideally linked to those dealing with functional genomics and other "-omic" technologies, plant breeding, molecular enzymology, bioinformatics and data analysis.
The course is ideally linked to those dealing with functional genomics and other "-omic" technologies, plant breeding, molecular enzymology, bioinformatics and data analysis.
Expected learning outcomes
Upon completing this course, students will acquire substantial knowledge on metabolic fluxes, on strategies that can be used to modify yield and on the tools available in plant biotechnology to achieve the objectives.
Lesson period: Second semester
Assessment methods: Esame
Assessment result: voto verbalizzato in trentesimi
Single course
This course can be attended as a single course.
Course syllabus and organization
Single session
Responsible
Course syllabus
Lectures delivered by prof. Morandini (covering 3 ECTS) deal with two fundamental questions of metabolic engineering: 1) what controls metabolic fluxes and intermediate concentrations and 2) which strategies /targets work better to modify yields or quality of a certain product, particularly those of industrial relevance. In order to tackle both questions, we introduce and apply the tools of the Metabolic Control Theory (elasticity, flux and concentration control coefficients). We shall discuss the interplay of supply and demand of metabolic intermediates, as well as the evidence in favour of the so-called 'parallel activation' to increase fluxes and the implications for manipulation strategies employing transcription factors. Several case studies (and the relative successes and failures) of plant biotechnology interventions will be discussed, among which the manipulation of photosynthesis and biosynthetic pathways for the following products: vitamins (A, B9, E), amino acids, starch, lipids, and cofactors (ATP, NADPH).
The section taught by Dr. Tadini (3 ECTS) provides an overview of the principles and applications of modern plant biotechnology for the production of food, feed, biofuels, and other industrially relevant compounds. This part covers the molecular basis of plant transformation, genome manipulation, and the design of plant expression vectors, including promoters, reporter and selectable marker genes, and strategies for generating marker-free transgenic plants. It also examines the manipulation of transcription factors to engineer plant metabolism and physiological processes, with examples involving anthocyanin, carotenoid, and lignin biosynthesis, photosynthesis, and photoprotection. Different approaches for improving herbicide tolerance and resistance to biotic and abiotic stresses are compared, including mutagenesis, transgenesis, and genome editing. Finally, the course discusses advanced methods for identifying and introducing beneficial alleles through genome editing, together with representative applications for enhancing biomass production, bioenergy potential, and other agronomically important traits.
The section taught by Dr. Tadini (3 ECTS) provides an overview of the principles and applications of modern plant biotechnology for the production of food, feed, biofuels, and other industrially relevant compounds. This part covers the molecular basis of plant transformation, genome manipulation, and the design of plant expression vectors, including promoters, reporter and selectable marker genes, and strategies for generating marker-free transgenic plants. It also examines the manipulation of transcription factors to engineer plant metabolism and physiological processes, with examples involving anthocyanin, carotenoid, and lignin biosynthesis, photosynthesis, and photoprotection. Different approaches for improving herbicide tolerance and resistance to biotic and abiotic stresses are compared, including mutagenesis, transgenesis, and genome editing. Finally, the course discusses advanced methods for identifying and introducing beneficial alleles through genome editing, together with representative applications for enhancing biomass production, bioenergy potential, and other agronomically important traits.
Prerequisites for admission
A substantial background in basic biochemistry, genetics, molecular biology and functional genomics, as normally gained in a bachelor curriculum of Biology or Biotechnology, is highly recommended. Good mastering of plant biochemistry is helpful but not an absolute requirement.
Teaching methods
Lectures are delivered in classroom ("in presence") in traditional format, supported by presentations (PowerPoint and/or PDF documents). The course places strong emphasis on fostering active student participation and critical thinking through discussions of background knowledge, theoretical concepts, experimental design, data (figures and table) from original publications and case studies; attendance is recommended.
Teaching Resources
All teaching material (ppt or pdf files), background material and key papers are mentioned in the lecture files and, whenever possible, are made available through the Ariel website (https://myariel.unimi.it/course/view.php?id=12518).
The material is made available only to registered students and should not be distributed further. Erasmus students or students from other faculties should contact prof. Morandini for gaining access to the website.
A major reference book about metabolic control theory is the following: Fell, Understanding the control of Metabolism, Portland Press (1997). The book is available in the central library.
The material is made available only to registered students and should not be distributed further. Erasmus students or students from other faculties should contact prof. Morandini for gaining access to the website.
A major reference book about metabolic control theory is the following: Fell, Understanding the control of Metabolism, Portland Press (1997). The book is available in the central library.
Assessment methods and Criteria
The exam is oral and consists of several questions on each section of the program. The two parts of the exam can be sustained separately, but the grade will result from the joint evaluation of each candidate by both instructors. Examples of typical questions asked during the examination are discussed during classes and are provided as a text file made available in the Ariel website.
During the examination, students are required to master the basics of Metabolic Control Theory, to remember the essential details of the various metabolic engineering interventions and to argue on the basis of key evidences. Failure on any of these aspects implies a reduction in the score.
Regarding dr. Tadini's part, students are offered the possibility to present and discuss a research article selected from a list provided by the teacher on topics relevant to the syllabus.
During the examination, students are required to master the basics of Metabolic Control Theory, to remember the essential details of the various metabolic engineering interventions and to argue on the basis of key evidences. Failure on any of these aspects implies a reduction in the score.
Regarding dr. Tadini's part, students are offered the possibility to present and discuss a research article selected from a list provided by the teacher on topics relevant to the syllabus.
BIOS-02/A - Plant Physiology - University credits: 3
BIOS-14/A - Genetics - University credits: 3
BIOS-14/A - Genetics - University credits: 3
Lectures: 48 hours
Professors:
Morandini Piero Angelo, Tadini Luca
Professor(s)
Reception:
Please, contact me by email to fix an appointment
via Celoria 10, building 22120, floor -1