Design and Optimization of Monoclonal Antibodies

A.Y. 2025/2026
9
Max ECTS
72
Overall hours
SSD
BIO/10 BIO/13 BIO/14
Language
Italian
Learning objectives
The purpose of this course is that participants gain knowledge on and understand:
- the principal biological features of mAbs used both in research and therapy
- the computational strategies, and their accuracy, for studying and modelling mAbs
- the main methods to produce mAbs, and to in silico and in vitro predict and validate their mechanisms of action (MoA)
- the safety and efficacy of monoclonal antibodies in vivo, with key examples of their application in the clinical setting
Expected learning outcomes
At the end of the course, the student is expected:
- to know:
- the principal biological features of mAbs
- the application of the molecular and computational methods used in mAb analyses and design
-the different mechanisms of action of mAbs
- to critically evaluate:
- the pros and cons of in silico and in vitro approaches for mAb design and production
- the efficacy and safety of mAbs in clinical trials
to gain:
- the bases for deeply understanding development methods and applications of mAbs in research and therapy, with particular attention to scientific papers and/or clinical data and reports;
to obtain:
a multifaceted biological, bioinformatics and pharmacological knowledgebase useful for further student's personal study of this topic.
Single course

This course can be attended as a single course.

Course syllabus and organization

Single session

Lesson period
Second semester
Prerequisites for admission
The course requires basic knowledge of biology, biochemical genetics, and molecular biology.
Assessment methods and Criteria
Module: In silico, molecular, and cellular approaches for the design of monoclonal antibodies
The exam will consist of a written test. Upon obtaining a passing grade, students will be admitted to an oral examination.

Module: Pharmacology of monoclonal antibodies
The exam will consist of a written test.
In silico, molecular and cellular approaches for monoclonal antibody design
Course syllabus
This module aims to provide students with fundamental concepts regarding the characterization of monoclonal antibodies (mAbs), as well as the computational and biotechnological strategies used in their design and production.

Introduction to proteins as therapeutic agents and the immune response

Structure of mAbs and their structural and functional features

Antigen-antibody binding and molecular recognition mechanisms

Computational strategies to design and/or optimize mAbs

Generation of mAbs: murine, chimeric, humanized, and human

Biotechnological synthesis of mAbs: from hybridomas to phage display

Antibody engineering: naked antibodies, conjugated antibodies, and antibody fragments

Application of mAbs in biological research
Teaching methods
Lectures. Each class session will last 2 hours. Through content presentation and interactive dialogue, students will critically learn the fundamentals of designing effective mAbs for therapeutic and/or research purposes. Active teaching methods will be used, such as Wooclap for assessment, self-evaluation, and knowledge consolidation, and flipped-classroom techniques to promote a critical approach to the subject.
Teaching Resources
Students will be provided with slides and scientific articles presented during the lectures. Recommended textbooks for further study:

"Biotechnological drugs, pharmacological and clinical aspects" by Vegeto, Maggi, Minghetti - CEA

"Cellular and Molecular Immunology" by Abbas, Lichtman - EDRA
Pharmacology of Monoclonal Antibodies
Course syllabus
This module aims to discuss the safety and efficacy of mAbs in vivo by studying their mechanisms of action and their clinical applications across various diseases.

Mechanism of action of monoclonal antibodies: cell-mediated cytotoxicity and complement-dependent cytotoxicity

Role of FC gamma receptor classes in the antibody response

Pharmacological basis for the loss of efficacy of monoclonal antibodies

Evaluation of clinical endpoints in oncology therapies using monoclonal antibodies

Clinical aspects of monoclonal antibody use in other chronic diseases
Teaching methods
Lectures. Each class session will last 2 hours. Through content presentation and interactive dialogue, students will critically learn the fundamentals of designing effective mAbs for therapeutic and/or research purposes.
Teaching Resources
Students will be provided with slides and scientific articles presented during the lectures. Recommended textbooks for further study:

"Biotechnological drugs, pharmacological and clinical aspects" by Vegeto, Maggi, Minghetti - CEA

"Cellular and Molecular Immunology" by Abbas, Lichtman - EDRA
Modules or teaching units
In silico, molecular and cellular approaches for monoclonal antibody design
BIO/10 - BIOCHEMISTRY - University credits: 3
BIO/13 - EXPERIMENTAL BIOLOGY - University credits: 3
Lessons: 48 hours

Pharmacology of Monoclonal Antibodies
BIO/14 - PHARMACOLOGY - University credits: 3
Lessons: 24 hours

Professor(s)
Reception:
On Mondays, Wednesdays and Fridays from 9 to 10 am and on appointment previously taken via Microsoft Teams or email
Microsoft Teams
Reception:
on appointment